BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D07LP1|AL429055
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1238 1727 0.0
>3x_Contig1238
Length = 5289
Score = 1727 bits (871), Expect = 0.0
Identities = 878/879 (99%), Gaps = 1/879 (0%)
Strand = Plus / Plus
Query: 4 accgattgaagctatagcactatgggagttgggctattcgaaggaaactgccggtgctat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 accgattgaagctatagcactatgggagttgggctattcgaaggaaactgccggtgctat 2888
Query: 64 gaccgacgcgatcaaatattaccgtaaagcattaaggatgaatccggacgttgagaaact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 gaccgacgcgatcaaatattaccgtaaagcattaaggatgaatccggacgttgagaaact 2948
Query: 124 atatagaaagaagatgcatgatgaatggcggttaaatgaagagatgaaaaagcttaagct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2949 atatagaaagaagatgcatgatgaatggcggttaaatgaagagatgaaaaagcttaagct 3008
Query: 184 caattctaatgtcaatattgttgatggttcatcggaaactgatccggacggcagaaaaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3009 caattctaatgtcaatattgttgatggttcatcggaaactgatccggacggcagaaaaga 3068
Query: 244 ggaaactgaaggactttctcaaactgaagaccttgttgaacttccctgctggattttgga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3069 ggaaactgaaggactttctcaaactgaagaccttgttgaacttccctgctggattttgga 3128
Query: 304 tatgctccctgacgatatattatccatgattatagacatggttgtgttaagctcagcaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3129 tatgctccctgacgatatattatccatgattatagacatggttgtgttaagctcagcaga 3188
Query: 364 ctcgtggatgaacctatctttgacttgtaaaaagtttaatttgctatgcttccacgattc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3189 ctcgtggatgaacctatctttgacttgtaaaaagtttaatttgctatgcttccacgattc 3248
Query: 424 ctcaccgtaccggactttcgcggaatacatctataagaagcaagtatacaacgaaaatga 483
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3249 ctcac-gtaccggactttcgcggaatacatctataagaagcaagtatacaacgaaaatga 3307
Query: 484 gatgaggctaaacggtatatcagatatacaagcactagcagaaaccgtatggggtcaaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3308 gatgaggctaaacggtatatcagatatacaagcactagcagaaaccgtatggggtcaaaa 3367
Query: 544 ttatagaaagatgctaaaggaacggccgtatatcaagttccatggaatatatatcagtgt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3368 ttatagaaagatgctaaaggaacggccgtatatcaagttccatggaatatatatcagtgt 3427
Query: 604 ggtgaattatttgaggcacggatcgatcccggaaggatcatcttcgctgttgaacccaat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3428 ggtgaattatttgaggcacggatcgatcccggaaggatcatcttcgctgttgaacccaat 3487
Query: 664 ccacatgatcacttattacaggtacttcagattctatccagatggaagatgcattagatt 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3488 ccacatgatcacttattacaggtacttcagattctatccagatggaagatgcattagatt 3547
Query: 724 attgactactgacgaaccaaatatagtggtacctggtttctctttagaaagatgttctga 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3548 attgactactgacgaaccaaatatagtggtacctggtttctctttagaaagatgttctga 3607
Query: 784 aagaaaagactcagatatatgttcgtggtccctgtcattagacgacggccttgatcagtt 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3608 aagaaaagactcagatatatgttcgtggtccctgtcattagacgacggccttgatcagtt 3667
Query: 844 gacaatcaagaggaatagaagaaaagatgggcttgaatt 882
|||||||||||||||||||||||||||||||||||||||
Sbjct: 3668 gacaatcaagaggaatagaagaaaagatgggcttgaatt 3706
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6320
Number of Sequences: 1807
Number of extensions: 6320
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)